GTPgammaS Tube decorated with kinesin
Resolution: 6.8 Å
EM Method: Helical reconstruction
Fitted PDBs: 7ysq
Q-score: 0.108
Zhou J, Wang A, Song Y, Liu N, Wang J, Li Y, Liang X, Li G, Chu H, Wang HW
Nat Commun (2023) 14 pp. 5980-5980 [ Pubmed: 37749104 DOI: doi:10.1038/s41467-023-41615-w ]
- Gtpgammas-tube decorated with kinesin (440 kDa, Complex from Drosophila melanogaster)
- Guanosine-5'-triphosphate (523 Da, Ligand)
- Tubulin alpha chain (49 kDa, Protein from Drosophila melanogaster)
- Tubulin beta-1 chain (50 kDa, Protein from Drosophila melanogaster)
- 5'-guanosine-diphosphate-monothiophosphate (539 Da, Ligand)
GTPgammaS MT decorated with kinesin
Resolution: 4.3 Å
EM Method: Helical reconstruction
Fitted PDBs: 7ysr
Q-score: 0.371
Zhou J, Wang A, Song Y, Liu N, Wang J, Li Y, Liang X, Li G, Chu H, Wang HW
Nat Commun (2023) 14 pp. 5980-5980 [ Pubmed: 37749104 DOI: doi:10.1038/s41467-023-41615-w ]
- Guanosine-5'-triphosphate (523 Da, Ligand)
- 15-protofilament gtpgammas-mt decorated with kinesin (220 kDa, Complex from Drosophila melanogaster)
- Tubulin alpha chain (49 kDa, Protein from Drosophila melanogaster)
- Tubulin beta-1 chain (50 kDa, Protein from Drosophila melanogaster)
- 5'-guanosine-diphosphate-monothiophosphate (539 Da, Ligand)
Cryo-EM structure of microtubule-bound KLP61F motor domain in the AMPPNP state
Resolution: 4.4 Å
EM Method: Helical reconstruction
Fitted PDBs: 6vpo
Q-score: 0.324
Bodrug T, Wilson-Kubalek EM, Nithianantham S, Thompson AF, Alfieri A, Gaska I, Major J, Debs G, Inagaki S, Gutierrez P, Gheber L, McKenney RJ, Sindelar CV, Milligan R, Stumpff J, Rosenfeld SS, Forth ST, Al-Bassam J
eLife (2020) 9 [ DOI: doi:10.7554/eLife.51131 Pubmed: 31958056 ]
- Magnesium ion (24 Da, Ligand)
- Tubulin alpha-1a chain (50 kDa, Protein from Sus scrofa)
- Guanosine-5'-triphosphate (523 Da, Ligand)
- Kinesin-like protein klp61f (42 kDa, Protein from Drosophila melanogaster)
- Microtubule (Complex from Sus scrofa)
- Phosphoaminophosphonic acid-adenylate ester (506 Da, Ligand)
- Klp61f motor (Complex from Drosophila melanogaster)
- Guanosine-5'-diphosphate (443 Da, Ligand)
- Tubulin beta chain (49 kDa, Protein from Sus scrofa)
- Microtubule-bound klp61f motor in the amppnp state (Complex)
Cryo-EM structure of microtubule-bound KLP61F motor with tail domain in the nucleotide-free state
Resolution: 4.4 Å
EM Method: Helical reconstruction
Fitted PDBs: 6vpp
Q-score: 0.218
Bodrug T, Wilson-Kubalek EM, Nithianantham S, Thompson AF, Alfieri A, Gaska I, Major J, Debs G, Inagaki S, Gutierrez P, Gheber L, McKenney RJ, Sindelar CV, Milligan R, Stumpff J, Rosenfeld SS, Forth ST, Al-Bassam J
eLife (2020) 9 [ DOI: doi:10.7554/eLife.51131 Pubmed: 31958056 ]
- Magnesium ion (24 Da, Ligand)
- Tubulin alpha-1a chain (50 kDa, Protein from Sus scrofa)
- Guanosine-5'-triphosphate (523 Da, Ligand)
- Kinesin-like protein klp61f (42 kDa, Protein from Drosophila melanogaster)
- Microtubule (Complex from Sus scrofa)
- Klp61f motor (Complex from Drosophila melanogaster)
- Guanosine-5'-diphosphate (443 Da, Ligand)
- Tubulin beta chain (49 kDa, Protein from Sus scrofa)
- Microtubule-bound klp61f motor with tail domain in the nucleotide-free state (Complex)
KLP10A-AMPPNP in complex with curved tubulin and a microtubule
Resolution: 3.51 Å
EM Method: Helical reconstruction
Fitted PDBs: 6b0c
Q-score: 0.436
Benoit MPMH, Asenjo AB, Sosa H
Nat Commun (2018) 9 pp. 1662-1662 [ Pubmed: 29695795 DOI: doi:10.1038/s41467-018-04044-8 ]
- Taxol (853 Da, Ligand)
- Magnesium ion (24 Da, Ligand)
- Microtubule (Cellular component from Sus scrofa)
- Guanosine-5'-triphosphate (523 Da, Ligand)
- Tubulin alpha-1b chain (50 kDa, Protein from Sus scrofa)
- Tubulin beta chain (49 kDa, Protein from Sus scrofa)
- Klp10a-amppnp motor in complex with curved tubulin and a microtubule (Complex)
- Phosphoaminophosphonic acid-adenylate ester (506 Da, Ligand)
- Guanosine-5'-diphosphate (443 Da, Ligand)
- Kinesin-like protein klp10a (41 kDa, Protein from Drosophila melanogaster)
- Klp10a-amppnp motor (Complex from Drosophila melanogaster)
Apo KLP10A in complex with a microtubule
Resolution: 3.78 Å
EM Method: Helical reconstruction
Fitted PDBs: 6b0i
Q-score: 0.433
Benoit MPMH, Asenjo AB, Sosa H
Nat Commun (2018) 9 pp. 1662-1662 [ Pubmed: 29695795 DOI: doi:10.1038/s41467-018-04044-8 ]
- Taxol (853 Da, Ligand)
- Magnesium ion (24 Da, Ligand)
- Microtubule (Cellular component from Sus scrofa)
- Guanosine-5'-triphosphate (523 Da, Ligand)
- Tubulin alpha-1b chain (50 kDa, Protein from Sus scrofa)
- Tubulin beta chain (49 kDa, Protein from Sus scrofa)
- Apo-klp10a neck-motor in complex with a microtubule (Complex)
- Apo-klp10a neck-motor (Complex from Drosophila melanogaster)
- Guanosine-5'-diphosphate (443 Da, Ligand)
- Kinesin-like protein klp10a (46 kDa, Protein from Drosophila melanogaster)
KLP10A-AMPPNP in complex with a microtubule
Resolution: 3.98 Å
EM Method: Helical reconstruction
Fitted PDBs: 6b0l
Q-score: 0.314
Benoit MPMH, Asenjo AB, Sosa H
Nat Commun (2018) 9 pp. 1662-1662 [ Pubmed: 29695795 DOI: doi:10.1038/s41467-018-04044-8 ]
- Taxol (853 Da, Ligand)
- Magnesium ion (24 Da, Ligand)
- Microtubule (Cellular component from Sus scrofa)
- Guanosine-5'-triphosphate (523 Da, Ligand)
- Tubulin alpha-1b chain (50 kDa, Protein from Sus scrofa)
- Tubulin beta chain (49 kDa, Protein from Sus scrofa)
- Phosphoaminophosphonic acid-adenylate ester (506 Da, Ligand)
- Guanosine-5'-diphosphate (443 Da, Ligand)
- Kinesin-like protein klp10a (46 kDa, Protein from Drosophila melanogaster)
- Klp10a-amppmp in complex with a microtubule (Complex)
- Klp10a-amppmp (Complex from Drosophila melanogaster)
Resolution: 6.6 Å
EM Method: Helical reconstruction
Fitted PDBs: 5hnx
Q-score: 0.138
Yamagishi M, Shigematsu H, Yokoyama T, Kikkawa M, Sugawa M, Aoki M, Shirouzu M, Yajima J, Nitta R
Structure (2016) 24 pp. 1322-1334 [ Pubmed: 27452403 DOI: doi:10.1016/j.str.2016.05.021 ]
- Taxol (853 Da, Ligand)
- Magnesium ion (24 Da, Ligand)
- Tubulin alpha-1b chain (Complex from Bos taurus)
- Guanosine-5'-triphosphate (523 Da, Ligand)
- Minus-end directed ncd chimera nkn664 in the amppnp state complexed with gdp-taxol microtubule (Complex)
- Tubulin alpha-1b chain (50 kDa, Protein from Bos taurus)
- Tubulin beta-2b chain (49 kDa, Protein from Bos taurus)
- Guanosine-5'-diphosphate (443 Da, Ligand)
- Protein claret segregational,kinesin-1/kinesin-14,protein claret segregational (Complex)
- Protein claret segregational,kinesin-1/kinesin-14,protein claret segregational (41 kDa, Protein from Drosophila melanogaster)
- Tubulin beta-2b chain (Complex from Bos taurus)
Structural basis of backwards motion in kinesin-14: plus-end directed nKn669 in the AMPPNP state
Resolution: 6.3 Å
EM Method: Helical reconstruction
Fitted PDBs: 5hny
Q-score: 0.145
Yamagishi M, Shigematsu H, Yokoyama T, Kikkawa M, Sugawa M, Aoki M, Shirouzu M, Yajima J, Nitta R
Structure (2016) 24 pp. 1322-1334 [ Pubmed: 27452403 DOI: doi:10.1016/j.str.2016.05.021 ]
- Guanosine-5'-triphosphate (523 Da, Ligand)
- Protein claret segregational, kinesin-1/kinesin-14, protein claret segregational (41 kDa, Protein from Drosophila melanogaster)
- Magnesium ion (24 Da, Ligand)
- Tubulin beta-2b chain (Complex)
- Tubulin beta-2b chain (47 kDa, Protein from Bovine)
- Phosphoaminophosphonic acid-adenylate ester (506 Da, Ligand)
- Protein claret segregational,plus-end directed kinesin-1/kinesin-14,protein claret segregational (Complex)
- Guanosine-5'-diphosphate (443 Da, Ligand)
- Tubulin alpha-1b chain (Complex)
- Plus-end directed ncd chimera nkn669 in the amppnp state complexed with gdp-taxol microtubule (Complex)
- Taxol (853 Da, Ligand)
- Tubulin alpha-1b chain (48 kDa, Protein from Bovine)
Resolution: 5.8 Å
EM Method: Helical reconstruction
Fitted PDBs: 5hnz
Q-score: 0.144
Yamagishi M, Shigematsu H, Yokoyama T, Kikkawa M, Sugawa M, Aoki M, Shirouzu M, Yajima J, Nitta R
Structure (2016) 24 pp. 1322-1334 [ Pubmed: 27452403 DOI: doi:10.1016/j.str.2016.05.021 ]
- Taxol (853 Da, Ligand)
- Magnesium ion (24 Da, Ligand)
- Guanosine-5'-triphosphate (523 Da, Ligand)
- Tubulin alpha-1b chain (50 kDa, Protein from Bos taurus)
- Plus-end directed ncd chimera nkn669 in the nucleotide-free state complexed with gdp-taxol microtubule (Complex)
- Protein claret segregational,plus-end directed kinesin-1/kinesin-14,protein claret segregational (Complex)
- Tubulin beta-2b chain (49 kDa, Protein from Bos taurus)
- Guanosine-5'-diphosphate (443 Da, Ligand)
- Tubulin alpha-1b chain (Complex)
- Protein claret segregational,protein claret segregational,plus-end directed kinesin-1/kinesin-14,protein claret segregational,protein claret segregational (41 kDa, Protein from Drosophila melanogaster)
- Tubulin beta-2b chain (Complex)